Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 KRT8P13-201ENST00000463294 1010 ntBASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 AC006453.4-201ENST00000636949 1252 ntBASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HCFC1R1Q9NWW0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HCFC1R1Q9NWW0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 BTBD6P1-201ENST00000412176 1267 ntBASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 HOMER2P2-201ENST00000451621 847 ntBASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AL591846.1-201ENST00000451736 433 ntBASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AL022328.3-201ENST00000607943 679 ntBASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 AC005695.3-201ENST00000614522 232 ntBASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1R1Q9NWW0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC1R1Q9NWW0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HCFC1R1Q9NWW0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms