Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UBQLN4Q9NRR5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.46□□□□□ -0.1
UBQLN4Q9NRR5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 TSPY26P-202ENST00000565928 3884 ntBASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AC009477.1-201ENST00000452936 217 ntBASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.45□□□□□ -0.1
UBQLN4Q9NRR5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 CYMP-203ENST00000474680 1263 ntBASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 TIMM17BP1-201ENST00000545713 516 ntBASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AC009090.5-201ENST00000624886 2285 ntBASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms