Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AL354861.1-201ENST00000445213 355 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AC142086.5-202ENST00000562500 217 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AC084781.1-201ENST00000613737 656 ntBASIC14.24□□□□□ -0.13
CHD8Q9HCK8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC004408.2-201ENST00000623613 2777 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 VDAC1P1-201ENST00000439229 848 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC023906.1-201ENST00000486386 453 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC139713.2-201ENST00000641328 2723 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 BCL2L12P1-201ENST00000508390 733 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AL109837.1-201ENST00000603272 613 ntBASIC14.23□□□□□ -0.13
CHD8Q9HCK8 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.23□□□□□ -0.13
CHD8Q9HCK8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC005052.1-201ENST00000625181 2492 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 TSPY25P-201ENST00000429463 745 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AC083801.1-201ENST00000491689 358 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 MIR4313-201ENST00000580760 101 ntBASIC14.22□□□□□ -0.13
CHD8Q9HCK8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHD8Q9HCK8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms