Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 MIR4453-201ENST00000584019 89 ntBASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 KRT8P44-201ENST00000441609 1350 ntBASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.77■□□□□ 0.6
UPF3BQ9BZI7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
UPF3BQ9BZI7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 CICP24-201ENST00000605464 2705 ntBASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 RN7SL828P-201ENST00000607615 303 ntBASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPF3BQ9BZI7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 MTND6P24-201ENST00000440466 518 ntBASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AC023141.5-201ENST00000458585 616 ntBASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AC106028.4-201ENST00000614509 607 ntBASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AC007967.4-201ENST00000614700 386 ntBASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF3BQ9BZI7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AL513477.1-201ENST00000602865 2407 ntBASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms