Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RSPO3Q9BXY4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AC140479.7-201ENST00000636301 2332 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 RPL5P21-201ENST00000404620 815 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AC010336.2-201ENST00000564226 506 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AC015910.1-201ENST00000579400 975 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 TEX28P1-201ENST00000613479 1221 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AL138828.2-201ENST00000615812 383 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 TEX28P2-201ENST00000617764 1221 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 SPDYE12P-201ENST00000618416 771 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 AC007292.2-201ENST00000593524 1812 ntBASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RSPO3Q9BXY4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 GHSR-202ENST00000427970 912 ntBASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 SLED1-202ENST00000512051 380 ntBASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 HCG11-201ENST00000411553 5696 ntBASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 AC139749.1-202ENST00000617529 3139 ntBASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.35□□□□□ -0.11
RSPO3Q9BXY4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms