Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.94□□□□□ -0.02
BBS4Q96RK4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 CETN4P-206ENST00000642099 2168 ntBASIC14.94□□□□□ -0.02
BBS4Q96RK4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.94□□□□□ -0.02
BBS4Q96RK4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BBS4Q96RK4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 AC126177.1-201ENST00000547829 2218 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 AC023511.2-201ENST00000618803 211 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 KRT8P12-202ENST00000472924 1397 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 AC090616.6-203ENST00000579186 1945 ntBASIC14.93□□□□□ -0.02
BBS4Q96RK4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BBS4Q96RK4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BBS4Q96RK4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 PPT1-215ENST00000641471 2368 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AC104640.1-201ENST00000562617 2109 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 HLA-J-203ENST00000494367 1087 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 AC109322.1-201ENST00000524499 1264 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AL079307.3-201ENST00000556114 283 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 AC025678.2-201ENST00000562061 970 ntBASIC14.92□□□□□ -0.02
BBS4Q96RK4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.92□□□□□ -0.02
BBS4Q96RK4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BBS4Q96RK4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms