Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AC139530.3-201ENST00000620344 690 ntBASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 AC006486.2-201ENST00000624246 2199 ntBASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MS4A4EQ96PG1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AC144831.1-201ENST00000573312 2656 ntBASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AL512361.1-201ENST00000554200 418 ntBASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 AL158211.3-201ENST00000607385 239 ntBASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MS4A4EQ96PG1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MS4A4EQ96PG1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms