Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC243562.2-201ENST00000561247 970 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AL132655.2-201ENST00000596276 594 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC004840.1-201ENST00000636359 365 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 SSR4P1-203ENST00000599569 2260 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC104640.1-201ENST00000562617 2109 ntBASIC18.68■□□□□ 0.58
DDX11Q96FC9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
DDX11Q96FC9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DDX11Q96FC9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 NORAD-201ENST00000565493 5339 ntBASIC18.67■□□□□ 0.58
DDX11Q96FC9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 AL353779.1-201ENST00000434793 351 ntBASIC18.67■□□□□ 0.58
DDX11Q96FC9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 RN7SL618P-201ENST00000477850 296 ntBASIC18.67■□□□□ 0.58
DDX11Q96FC9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.67■□□□□ 0.58
DDX11Q96FC9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DDX11Q96FC9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX11Q96FC9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 REXO1L1P-202ENST00000608646 1974 ntBASIC18.66■□□□□ 0.58
DDX11Q96FC9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 COX5BP8-201ENST00000416911 349 ntBASIC18.66■□□□□ 0.58
DDX11Q96FC9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 TP53TG3HP-202ENST00000569755 579 ntBASIC18.66■□□□□ 0.58
DDX11Q96FC9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 AC026979.3-201ENST00000607315 403 ntBASIC18.66■□□□□ 0.58
DDX11Q96FC9 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX11Q96FC9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 AC009090.5-201ENST00000624886 2285 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms