Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 AL022328.1-201ENST00000610050 478 ntBASIC15.57■□□□□ 0.08
ARRDC3Q96B67 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 AC009090.5-201ENST00000624886 2285 ntBASIC15.57■□□□□ 0.08
ARRDC3Q96B67 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 PDIA3P1-201ENST00000471856 1510 ntBASIC15.57■□□□□ 0.08
ARRDC3Q96B67 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 AL138799.1-201ENST00000448213 1675 ntBASIC15.57■□□□□ 0.08
ARRDC3Q96B67 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ARRDC3Q96B67 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AC005229.1-201ENST00000392885 409 ntBASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AC106760.1-201ENST00000508690 800 ntBASIC15.56■□□□□ 0.08
ARRDC3Q96B67 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AC084364.1-201ENST00000551967 1556 ntBASIC15.56■□□□□ 0.08
ARRDC3Q96B67 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AL365203.3-201ENST00000609742 2057 ntBASIC15.56■□□□□ 0.08
ARRDC3Q96B67 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ARRDC3Q96B67 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AC092933.1-201ENST00000393644 945 ntBASIC15.55■□□□□ 0.08
ARRDC3Q96B67 BOLA2P3-201ENST00000404566 256 ntBASIC15.55■□□□□ 0.08
ARRDC3Q96B67 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AL355864.2-201ENST00000447420 863 ntBASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AC022137.2-201ENST00000503482 481 ntBASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
ARRDC3Q96B67 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms