Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
SHC3Q92529 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHC3Q92529 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.71■□□□□ 0.27
SHC3Q92529 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SHC3Q92529 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHC3Q92529 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.71■□□□□ 0.27
SHC3Q92529 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHC3Q92529 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SHC3Q92529 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.71■□□□□ 0.27
SHC3Q92529 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.71■□□□□ 0.26
SHC3Q92529 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.71■□□□□ 0.26
SHC3Q92529 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 BTBD7P1-201ENST00000447253 1453 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 AC138969.3-201ENST00000546612 1459 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 AC138932.2-201ENST00000548268 1459 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 AC126755.4-201ENST00000549796 1459 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 AC004890.2-204ENST00000481968 304 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 IGHV3-42-201ENST00000520410 361 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.7■□□□□ 0.26
SHC3Q92529 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 AC093512.1-201ENST00000617969 520 ntBASIC16.7■□□□□ 0.26
SHC3Q92529 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SHC3Q92529 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.7■□□□□ 0.26
SHC3Q92529 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.7■□□□□ 0.26
SHC3Q92529 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHC3Q92529 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 CICP11-201ENST00000434745 2827 ntBASIC16.69■□□□□ 0.26
SHC3Q92529 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SHC3Q92529 MROH4P-201ENST00000431302 1578 ntBASIC16.69■□□□□ 0.26
SHC3Q92529 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC3Q92529 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.69■□□□□ 0.26
SHC3Q92529 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.69■□□□□ 0.26
SHC3Q92529 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC3Q92529 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
SHC3Q92529 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.69■□□□□ 0.26
SHC3Q92529 AL390754.1-201ENST00000619088 582 ntBASIC16.69■□□□□ 0.26
SHC3Q92529 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.69■□□□□ 0.26
SHC3Q92529 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.69■□□□□ 0.26
SHC3Q92529 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHC3Q92529 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SHC3Q92529 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHC3Q92529 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms