Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.76■□□□□ 0.59
SNED1Q8TER0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNED1Q8TER0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 AL136309.1-201ENST00000403917 691 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 RPL17P11-201ENST00000417593 544 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 AC026740.1-201ENST00000607068 791 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 AL596087.1-201ENST00000400979 1969 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 LRRC59-203ENST00000576448 1531 ntBASIC18.75■□□□□ 0.59
SNED1Q8TER0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNED1Q8TER0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNED1Q8TER0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AC006449.5-201ENST00000610658 2098 ntBASIC18.74■□□□□ 0.59
SNED1Q8TER0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 MAGEA5-201ENST00000446757 942 ntBASIC18.74■□□□□ 0.59
SNED1Q8TER0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNED1Q8TER0 BNIP3P13-201ENST00000599968 566 ntBASIC18.74■□□□□ 0.59
SNED1Q8TER0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.74■□□□□ 0.59
SNED1Q8TER0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 PCDH8P1-201ENST00000428983 2773 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNED1Q8TER0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.73■□□□□ 0.59
SNED1Q8TER0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.73■□□□□ 0.59
SNED1Q8TER0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms