Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 AP001350.2-201ENST00000625104 1094 ntBASIC15.3■□□□□ 0.04
RNF217Q8TC41 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 AC106818.1-201ENST00000623223 3242 ntBASIC15.3■□□□□ 0.04
RNF217Q8TC41 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF217Q8TC41 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF217Q8TC41 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 ME2P1-201ENST00000426028 1970 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 RPS2P28-201ENST00000314255 741 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 AL450487.1-201ENST00000426799 995 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 PMS2P1-201ENST00000431037 1228 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 AC005593.1-201ENST00000624894 515 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 AL139011.1-202ENST00000642063 584 ntBASIC15.29■□□□□ 0.04
RNF217Q8TC41 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF217Q8TC41 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF217Q8TC41 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC105339.3-201ENST00000560043 636 ntBASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC091167.2-201ENST00000579581 588 ntBASIC15.28■□□□□ 0.04
RNF217Q8TC41 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF217Q8TC41 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF217Q8TC41 REXO1L3P-201ENST00000622202 1288 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms