Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC127383.1-201ENST00000444697 1800 ntBASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AC126755.1-201ENST00000525846 6405 ntBASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AC009118.2-201ENST00000613275 655 ntBASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC148Q8NFR7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 TOMM22P5-201ENST00000416399 439 ntBASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 KRT18P64-201ENST00000434946 1219 ntBASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AC104794.3-201ENST00000566840 1248 ntBASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AF228730.6-201ENST00000641497 218 ntBASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AC084121.3-201ENST00000641716 218 ntBASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC148Q8NFR7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CCDC148Q8NFR7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC148Q8NFR7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC148Q8NFR7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCDC148Q8NFR7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC148Q8NFR7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms