Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PHTF2Q8N3S3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 MIR1909-201ENST00000411312 80 ntBASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 AC017083.2-201ENST00000608069 979 ntBASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PHTF2Q8N3S3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC013268.4-201ENST00000637413 2228 ntBASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC007389.4-201ENST00000454674 793 ntBASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 AL033527.5-201ENST00000641382 801 ntBASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms