Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 AC007541.1-201ENST00000570282 1469 ntBASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC144CPQ8IYA2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 LINC02228-204ENST00000642115 2962 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 AC010336.2-201ENST00000564226 506 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 TSPY26P-202ENST00000565928 3884 ntBASIC18.57■□□□□ 0.56
CCDC144CPQ8IYA2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 AL607033.1-201ENST00000623900 1599 ntBASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 AC009090.5-201ENST00000624886 2285 ntBASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 AC135586.1-201ENST00000539323 574 ntBASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC144CPQ8IYA2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 GNAQP1-201ENST00000444815 1067 ntBASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 RN7SL618P-201ENST00000477850 296 ntBASIC18.55■□□□□ 0.56
CCDC144CPQ8IYA2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms