Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.09■□□□□ 0.01
RAB43Q86YS6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
RAB43Q86YS6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB43Q86YS6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.08■□□□□ 0
RAB43Q86YS6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RAB43Q86YS6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB43Q86YS6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.08■□□□□ 0
RAB43Q86YS6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.08■□□□□ 0
RAB43Q86YS6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.08■□□□□ 0
RAB43Q86YS6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.08■□□□□ 0
RAB43Q86YS6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.08■□□□□ 0
RAB43Q86YS6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.08■□□□□ 0
RAB43Q86YS6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RAB43Q86YS6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.08■□□□□ 0
RAB43Q86YS6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RAB43Q86YS6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.08■□□□□ 0
RAB43Q86YS6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 AC006058.4-201ENST00000624016 1670 ntBASIC15.07■□□□□ 0
RAB43Q86YS6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
RAB43Q86YS6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 POU5F1P6-201ENST00000466990 990 ntBASIC15.07■□□□□ 0
RAB43Q86YS6 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 AC011495.1-201ENST00000498085 584 ntBASIC15.07■□□□□ 0
RAB43Q86YS6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.07■□□□□ 0
RAB43Q86YS6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.07■□□□□ 0
RAB43Q86YS6 TPRX2P-201ENST00000535362 881 ntBASIC15.07■□□□□ 0
RAB43Q86YS6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
RAB43Q86YS6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.07■□□□□ 0
RAB43Q86YS6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.07■□□□□ 0
RAB43Q86YS6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB43Q86YS6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB43Q86YS6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.06■□□□□ 0
RAB43Q86YS6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.06■□□□□ 0
RAB43Q86YS6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms