Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AC091607.1-201ENST00000490318 1060 ntBASIC13.13□□□□□ -0.31
ZNF546Q86UE3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AP000867.4-201ENST00000641616 219 ntBASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AC092135.3-201ENST00000624151 1846 ntBASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 WASH6P-202ENST00000359512 1437 ntBASIC13.13□□□□□ -0.31
ZNF546Q86UE3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 DGCR9-201ENST00000609630 2415 ntBASIC13.12□□□□□ -0.31
ZNF546Q86UE3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 AP005901.3-202ENST00000581653 237 ntBASIC13.12□□□□□ -0.31
ZNF546Q86UE3 AC010331.1-201ENST00000611423 582 ntBASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF546Q86UE3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZNF546Q86UE3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms