Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 MED15P5-201ENST00000423150 992 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC142381.1-201ENST00000426099 345 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 RN7SL589P-201ENST00000481268 310 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 AC091812.2-201ENST00000619081 385 ntBASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.4□□□□□ -0.1
SMARCD3Q6STE5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 AC127383.1-201ENST00000444697 1800 ntBASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 AL590627.1-203ENST00000421194 1026 ntBASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 KRT18P3-201ENST00000451602 1288 ntBASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 AC027601.4-201ENST00000611259 610 ntBASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMARCD3Q6STE5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 AL136982.4-201ENST00000437689 1740 ntBASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.38□□□□□ -0.11
SMARCD3Q6STE5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms