Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 MIR1224-201ENST00000408193 85 ntBASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 UNC93B6-202ENST00000528242 690 ntBASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AL161645.1-201ENST00000622716 1255 ntBASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 FAM215A-202ENST00000632077 792 ntBASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC00242Q5T6M2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 AC007326.2-201ENST00000624224 7579 ntBASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00242Q5T6M2 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 SPTSSB-204ENST00000617024 1292 ntBASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 MED16-214ENST00000617672 554 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 AC148477.8-201ENST00000624298 468 ntBASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00242Q5T6M2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 AC140479.7-201ENST00000636301 2332 ntBASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00242Q5T6M2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms