Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 BOLA2P3-201ENST00000404566 256 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 BTNL10-201ENST00000595971 695 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 AC025181.2-201ENST00000606994 802 ntBASIC18.81■□□□□ 0.6
RFX7Q2KHR2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.81■□□□□ 0.6
RFX7Q2KHR2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 AC013268.4-201ENST00000637413 2228 ntBASIC18.8■□□□□ 0.6
RFX7Q2KHR2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 AC046158.3-201ENST00000624947 2558 ntBASIC18.8■□□□□ 0.6
RFX7Q2KHR2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ACTG1P3-201ENST00000431775 1114 ntBASIC18.8■□□□□ 0.6
RFX7Q2KHR2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 GAPDHP40-201ENST00000505218 1006 ntBASIC18.8■□□□□ 0.6
RFX7Q2KHR2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFX7Q2KHR2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AC132872.4-202ENST00000622924 2756 ntBASIC18.79■□□□□ 0.6
RFX7Q2KHR2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 KRT8P22-201ENST00000562317 1415 ntBASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AC008741.2-201ENST00000612792 3115 ntBASIC18.79■□□□□ 0.6
RFX7Q2KHR2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 VDAC1P7-201ENST00000462417 847 ntBASIC18.79■□□□□ 0.6
RFX7Q2KHR2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AP005482.1-201ENST00000563722 1273 ntBASIC18.79■□□□□ 0.6
RFX7Q2KHR2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX7Q2KHR2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX7Q2KHR2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms