Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.51■□□□□ 0.23
DSC1Q08554 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.51■□□□□ 0.23
DSC1Q08554 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.51■□□□□ 0.23
DSC1Q08554 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 MIR6787-201ENST00000616675 61 ntBASIC16.51■□□□□ 0.23
DSC1Q08554 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
DSC1Q08554 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
DSC1Q08554 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
DSC1Q08554 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
DSC1Q08554 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.51■□□□□ 0.23
DSC1Q08554 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DSC1Q08554 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 PCDHB19P-201ENST00000570871 2371 ntBASIC16.5■□□□□ 0.23
DSC1Q08554 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 AL158070.2-201ENST00000623713 1621 ntBASIC16.5■□□□□ 0.23
DSC1Q08554 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.5■□□□□ 0.23
DSC1Q08554 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.5■□□□□ 0.23
DSC1Q08554 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 GPR182-203ENST00000622922 591 ntBASIC16.5■□□□□ 0.23
DSC1Q08554 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.5■□□□□ 0.23
DSC1Q08554 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 KRT8P14-201ENST00000414254 1442 ntBASIC16.5■□□□□ 0.23
DSC1Q08554 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.5■□□□□ 0.23
DSC1Q08554 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 AC020907.1-201ENST00000616460 1350 ntBASIC16.5■□□□□ 0.23
DSC1Q08554 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
DSC1Q08554 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
DSC1Q08554 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.49■□□□□ 0.23
DSC1Q08554 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DSC1Q08554 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 GOLGA2P4-201ENST00000441462 777 ntBASIC16.49■□□□□ 0.23
DSC1Q08554 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.49■□□□□ 0.23
DSC1Q08554 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.49■□□□□ 0.23
DSC1Q08554 PFN1P12-201ENST00000455938 534 ntBASIC16.49■□□□□ 0.23
DSC1Q08554 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.49■□□□□ 0.23
DSC1Q08554 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.49■□□□□ 0.23
DSC1Q08554 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.49■□□□□ 0.23
DSC1Q08554 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 PKD1P1-201ENST00000458669 6805 ntBASIC16.49■□□□□ 0.23
DSC1Q08554 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DSC1Q08554 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
DSC1Q08554 KRT8P44-201ENST00000441609 1350 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms