Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VBP1P61758 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.14□□□□□ -0.15
VBP1P61758 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 TSPY5P-201ENST00000426936 936 ntBASIC14.14□□□□□ -0.15
VBP1P61758 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.14□□□□□ -0.15
VBP1P61758 MINOS1P3-201ENST00000457048 203 ntBASIC14.14□□□□□ -0.15
VBP1P61758 BX005266.1-201ENST00000473402 457 ntBASIC14.14□□□□□ -0.15
VBP1P61758 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.14□□□□□ -0.15
VBP1P61758 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VBP1P61758 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.14□□□□□ -0.15
VBP1P61758 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 AC005562.1-201ENST00000583030 3219 ntBASIC14.13□□□□□ -0.15
VBP1P61758 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.13□□□□□ -0.15
VBP1P61758 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.13□□□□□ -0.15
VBP1P61758 ABCD1P5-201ENST00000445663 754 ntBASIC14.13□□□□□ -0.15
VBP1P61758 PRYP5-201ENST00000451909 266 ntBASIC14.13□□□□□ -0.15
VBP1P61758 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.13□□□□□ -0.15
VBP1P61758 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.13□□□□□ -0.15
VBP1P61758 AC011498.5-201ENST00000592027 486 ntBASIC14.13□□□□□ -0.15
VBP1P61758 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.13□□□□□ -0.15
VBP1P61758 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.13□□□□□ -0.15
VBP1P61758 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VBP1P61758 AP001267.2-201ENST00000532619 2086 ntBASIC14.13□□□□□ -0.15
VBP1P61758 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms