Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 REXO1L9P-201ENST00000604264 2108 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 HOMER2P2-201ENST00000451621 847 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AL353622.2-201ENST00000605846 425 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 AC026979.3-201ENST00000607315 403 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AL645608.8-201ENST00000606034 2086 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 AC134312.5-201ENST00000568031 1313 ntBASIC13.09□□□□□ -0.31
RIPPLY3P57055 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RIPPLY3P57055 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RIPPLY3P57055 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RIPPLY3P57055 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.08□□□□□ -0.31
RIPPLY3P57055 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RIPPLY3P57055 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RIPPLY3P57055 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
RIPPLY3P57055 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RIPPLY3P57055 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AL357373.1-201ENST00000394974 322 ntBASIC13.08□□□□□ -0.32
RIPPLY3P57055 SPDYE17-201ENST00000412399 783 ntBASIC13.08□□□□□ -0.32
RIPPLY3P57055 CNN2P8-201ENST00000421872 913 ntBASIC13.08□□□□□ -0.32
RIPPLY3P57055 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RIPPLY3P57055 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.08□□□□□ -0.32
RIPPLY3P57055 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms