Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.1■□□□□ 0.01
EPHA4P54764 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
EPHA4P54764 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.1■□□□□ 0.01
EPHA4P54764 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 CYP2T1P-202ENST00000641596 2535 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
EPHA4P54764 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA4P54764 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.09■□□□□ 0.01
EPHA4P54764 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 LINC02447-202ENST00000501888 2146 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA4P54764 SLC25A47P1-201ENST00000531577 414 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA4P54764 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.09■□□□□ 0.01
EPHA4P54764 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 AP005482.1-201ENST00000563722 1273 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 AP001063.1-201ENST00000568332 529 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 AL022328.1-201ENST00000610050 478 ntBASIC15.09■□□□□ 0.01
EPHA4P54764 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.09■□□□□ 0.01
EPHA4P54764 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.09■□□□□ 0.01
EPHA4P54764 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EPHA4P54764 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
EPHA4P54764 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
EPHA4P54764 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
EPHA4P54764 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
EPHA4P54764 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
EPHA4P54764 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.08■□□□□ 0
EPHA4P54764 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.08■□□□□ 0
EPHA4P54764 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.08■□□□□ 0
EPHA4P54764 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 AC005229.1-201ENST00000392885 409 ntBASIC15.08■□□□□ 0
EPHA4P54764 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 MIR1909-201ENST00000411312 80 ntBASIC15.08■□□□□ 0
EPHA4P54764 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.08■□□□□ 0
EPHA4P54764 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
EPHA4P54764 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
EPHA4P54764 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 AC022210.1-201ENST00000449856 793 ntBASIC15.08■□□□□ 0
EPHA4P54764 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.08■□□□□ 0
EPHA4P54764 AC068587.3-201ENST00000526613 355 ntBASIC15.08■□□□□ 0
EPHA4P54764 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
EPHA4P54764 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.08■□□□□ 0
EPHA4P54764 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms