Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.12■□□□□ 0.65
PDE1AP54750 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PDE1AP54750 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE1AP54750 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PDE1AP54750 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 BTBD7P1-201ENST00000447253 1453 ntBASIC19.12■□□□□ 0.65
PDE1AP54750 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 MRPS18AP1-201ENST00000414458 589 ntBASIC19.12■□□□□ 0.65
PDE1AP54750 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE1AP54750 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 AL589987.1-201ENST00000453380 819 ntBASIC19.12■□□□□ 0.65
PDE1AP54750 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.12■□□□□ 0.65
PDE1AP54750 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.12■□□□□ 0.65
PDE1AP54750 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.12■□□□□ 0.65
PDE1AP54750 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
PDE1AP54750 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.12■□□□□ 0.65
PDE1AP54750 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 AC022144.1-201ENST00000602255 1580 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 AC138969.3-201ENST00000546612 1459 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 AC138932.2-201ENST00000548268 1459 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 AC126755.4-201ENST00000549796 1459 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 TCAF2P1-201ENST00000291129 2421 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
PDE1AP54750 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 AC004790.1-201ENST00000612686 536 ntBASIC19.11■□□□□ 0.65
PDE1AP54750 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.11■□□□□ 0.65
PDE1AP54750 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.11■□□□□ 0.65
PDE1AP54750 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDE1AP54750 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE1AP54750 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE1AP54750 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDE1AP54750 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE1AP54750 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
PDE1AP54750 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE1AP54750 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE1AP54750 FAM8A3P-201ENST00000427218 844 ntBASIC19.1■□□□□ 0.65
PDE1AP54750 KRT18P43-201ENST00000469825 1281 ntBASIC19.1■□□□□ 0.65
PDE1AP54750 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.1■□□□□ 0.65
PDE1AP54750 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.1■□□□□ 0.65
PDE1AP54750 AL391069.4-201ENST00000609583 481 ntBASIC19.1■□□□□ 0.65
PDE1AP54750 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.1■□□□□ 0.65
PDE1AP54750 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE1AP54750 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.1■□□□□ 0.65
PDE1AP54750 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE1AP54750 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDE1AP54750 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDE1AP54750 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms