Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.27■□□□□ 0.36
PMS1P54277 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 AL512361.1-201ENST00000554200 418 ntBASIC17.27■□□□□ 0.36
PMS1P54277 SNHG9-202ENST00000564014 471 ntBASIC17.27■□□□□ 0.36
PMS1P54277 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.27■□□□□ 0.36
PMS1P54277 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 AC025048.3-201ENST00000590609 569 ntBASIC17.27■□□□□ 0.36
PMS1P54277 AC005702.4-201ENST00000618393 416 ntBASIC17.27■□□□□ 0.36
PMS1P54277 SPDYE12P-201ENST00000618416 771 ntBASIC17.27■□□□□ 0.36
PMS1P54277 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PMS1P54277 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.27■□□□□ 0.36
PMS1P54277 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PMS1P54277 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.27■□□□□ 0.35
PMS1P54277 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PMS1P54277 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
PMS1P54277 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PMS1P54277 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PMS1P54277 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PMS1P54277 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PMS1P54277 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.27■□□□□ 0.35
PMS1P54277 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.27■□□□□ 0.35
PMS1P54277 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PMS1P54277 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 Z97205.2-201ENST00000564697 1639 ntBASIC17.26■□□□□ 0.35
PMS1P54277 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PMS1P54277 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.26■□□□□ 0.35
PMS1P54277 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.26■□□□□ 0.35
PMS1P54277 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PMS1P54277 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.26■□□□□ 0.35
PMS1P54277 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.26■□□□□ 0.35
PMS1P54277 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.26■□□□□ 0.35
PMS1P54277 Z92544.3-201ENST00000624747 417 ntBASIC17.26■□□□□ 0.35
PMS1P54277 AF228730.6-201ENST00000641497 218 ntBASIC17.26■□□□□ 0.35
PMS1P54277 AC084121.3-201ENST00000641716 218 ntBASIC17.26■□□□□ 0.35
PMS1P54277 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 CETN4P-206ENST00000642099 2168 ntBASIC17.26■□□□□ 0.35
PMS1P54277 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PMS1P54277 CICP23-201ENST00000605013 2741 ntBASIC17.26■□□□□ 0.35
PMS1P54277 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PMS1P54277 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.25■□□□□ 0.35
PMS1P54277 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PMS1P54277 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PMS1P54277 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PMS1P54277 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PMS1P54277 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.25■□□□□ 0.35
PMS1P54277 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
PMS1P54277 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms