Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC3P51654 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 AC134915.1-201ENST00000426461 574 ntBASIC17.28■□□□□ 0.36
GPC3P51654 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC3P51654 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.28■□□□□ 0.36
GPC3P51654 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC3P51654 RAB43P1-201ENST00000561790 589 ntBASIC17.28■□□□□ 0.36
GPC3P51654 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 AC015936.2-201ENST00000593177 259 ntBASIC17.28■□□□□ 0.36
GPC3P51654 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC3P51654 CU634019.7-201ENST00000624153 1185 ntBASIC17.28■□□□□ 0.36
GPC3P51654 FP236241.2-201ENST00000624906 1185 ntBASIC17.28■□□□□ 0.36
GPC3P51654 PAUPAR-201ENST00000630360 2965 ntBASIC17.28■□□□□ 0.36
GPC3P51654 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
GPC3P51654 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC3P51654 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
GPC3P51654 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.27■□□□□ 0.36
GPC3P51654 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
GPC3P51654 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
GPC3P51654 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 RPL13AP25-201ENST00000484130 612 ntBASIC17.27■□□□□ 0.36
GPC3P51654 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.27■□□□□ 0.36
GPC3P51654 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GPC3P51654 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC3P51654 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC3P51654 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC3P51654 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.27■□□□□ 0.35
GPC3P51654 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC3P51654 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC3P51654 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.27■□□□□ 0.35
GPC3P51654 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GPC3P51654 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GPC3P51654 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC3P51654 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GPC3P51654 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GPC3P51654 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC3P51654 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GPC3P51654 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC3P51654 VDAC1P7-201ENST00000462417 847 ntBASIC17.26■□□□□ 0.35
GPC3P51654 USP32P1-208ENST00000506594 1164 ntBASIC17.26■□□□□ 0.35
GPC3P51654 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.26■□□□□ 0.35
GPC3P51654 AC120045.2-201ENST00000567334 178 ntBASIC17.26■□□□□ 0.35
GPC3P51654 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.26■□□□□ 0.35
GPC3P51654 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms