Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
GABRA4P48169 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GABRA4P48169 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.8□□□□□ -0.04
GABRA4P48169 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 ACA64.2-201ENST00000459014 129 ntBASIC14.8□□□□□ -0.04
GABRA4P48169 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
GABRA4P48169 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 HILS1-202ENST00000545329 423 ntBASIC14.8□□□□□ -0.04
GABRA4P48169 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.8□□□□□ -0.04
GABRA4P48169 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.8□□□□□ -0.04
GABRA4P48169 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GABRA4P48169 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GABRA4P48169 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GABRA4P48169 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
GABRA4P48169 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GABRA4P48169 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GABRA4P48169 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GABRA4P48169 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.79□□□□□ -0.04
GABRA4P48169 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GABRA4P48169 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.79□□□□□ -0.04
GABRA4P48169 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 CICP13-201ENST00000422015 2789 ntBASIC14.79□□□□□ -0.04
GABRA4P48169 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.79□□□□□ -0.04
GABRA4P48169 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.79□□□□□ -0.04
GABRA4P48169 AC093433.1-201ENST00000458048 571 ntBASIC14.79□□□□□ -0.04
GABRA4P48169 KRT17P8-201ENST00000540749 863 ntBASIC14.79□□□□□ -0.04
GABRA4P48169 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.79□□□□□ -0.04
GABRA4P48169 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GABRA4P48169 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.79□□□□□ -0.04
GABRA4P48169 BTNL10-201ENST00000595971 695 ntBASIC14.79□□□□□ -0.04
GABRA4P48169 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GABRA4P48169 AC233724.13-201ENST00000598383 410 ntBASIC14.79□□□□□ -0.04
GABRA4P48169 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GABRA4P48169 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 MSTO2P-201ENST00000314835 1709 ntBASIC14.78□□□□□ -0.04
GABRA4P48169 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.78□□□□□ -0.04
GABRA4P48169 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.78□□□□□ -0.04
GABRA4P48169 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.78□□□□□ -0.04
GABRA4P48169 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GABRA4P48169 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms