Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A2P43004 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 RPL37AP1-201ENST00000412502 279 ntBASIC15.65■□□□□ 0.1
SLC1A2P43004 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC1A2P43004 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 HLA-J-203ENST00000494367 1087 ntBASIC15.65■□□□□ 0.1
SLC1A2P43004 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A2P43004 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC1A2P43004 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 LINC02228-204ENST00000642115 2962 ntBASIC15.65■□□□□ 0.1
SLC1A2P43004 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC1A2P43004 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC1A2P43004 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC1A2P43004 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
SLC1A2P43004 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
SLC1A2P43004 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A2P43004 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC1A2P43004 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 AL139400.1-201ENST00000366220 510 ntBASIC15.64■□□□□ 0.09
SLC1A2P43004 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.64■□□□□ 0.09
SLC1A2P43004 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 SPDYE12P-201ENST00000618416 771 ntBASIC15.64■□□□□ 0.09
SLC1A2P43004 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC1A2P43004 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SLC1A2P43004 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC1A2P43004 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC1A2P43004 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A2P43004 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SLC1A2P43004 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SLC1A2P43004 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC1A2P43004 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC1A2P43004 AC084364.1-201ENST00000551967 1556 ntBASIC15.63■□□□□ 0.09
SLC1A2P43004 AGAP7P-201ENST00000582299 2062 ntBASIC15.63■□□□□ 0.09
SLC1A2P43004 AGAP14-201ENST00000624701 2060 ntBASIC15.63■□□□□ 0.09
SLC1A2P43004 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC1A2P43004 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms