Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HOXC12P31275 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.99□□□□□ -0.17
HOXC12P31275 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.99□□□□□ -0.17
HOXC12P31275 BTBD7P1-201ENST00000447253 1453 ntBASIC13.99□□□□□ -0.17
HOXC12P31275 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HOXC12P31275 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CYP2T1P-202ENST00000641596 2535 ntBASIC13.98□□□□□ -0.17
HOXC12P31275 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 SDHAP3-202ENST00000515467 728 ntBASIC13.98□□□□□ -0.17
HOXC12P31275 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.98□□□□□ -0.17
HOXC12P31275 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HOXC12P31275 AC132938.2-201ENST00000579188 680 ntBASIC13.98□□□□□ -0.17
HOXC12P31275 AC004840.1-201ENST00000636359 365 ntBASIC13.98□□□□□ -0.17
HOXC12P31275 AL591163.1-201ENST00000641757 987 ntBASIC13.98□□□□□ -0.17
HOXC12P31275 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HOXC12P31275 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
HOXC12P31275 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HOXC12P31275 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 BNIP3P1-202ENST00000550043 1585 ntBASIC13.97□□□□□ -0.17
HOXC12P31275 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXC12P31275 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXC12P31275 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.97□□□□□ -0.17
HOXC12P31275 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXC12P31275 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.97□□□□□ -0.17
HOXC12P31275 AC135586.1-201ENST00000539323 574 ntBASIC13.97□□□□□ -0.17
HOXC12P31275 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXC12P31275 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXC12P31275 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.97□□□□□ -0.17
HOXC12P31275 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms