Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HOXA10P31260 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA10P31260 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA10P31260 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 HLA-K-203ENST00000430151 1046 ntBASIC18.84■□□□□ 0.61
HOXA10P31260 AL133466.1-201ENST00000447582 150 ntBASIC18.84■□□□□ 0.61
HOXA10P31260 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXA10P31260 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA10P31260 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.84■□□□□ 0.61
HOXA10P31260 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 AC004466.1-201ENST00000599515 1080 ntBASIC18.84■□□□□ 0.61
HOXA10P31260 BNIP3P13-201ENST00000599968 566 ntBASIC18.84■□□□□ 0.61
HOXA10P31260 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA10P31260 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HOXA10P31260 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA10P31260 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXA10P31260 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA10P31260 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA10P31260 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HOXA10P31260 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXA10P31260 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HOXA10P31260 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HOXA10P31260 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
HOXA10P31260 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.83■□□□□ 0.61
HOXA10P31260 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA10P31260 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.83■□□□□ 0.6
HOXA10P31260 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA10P31260 TMEM198B-204ENST00000484016 896 ntBASIC18.83■□□□□ 0.6
HOXA10P31260 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
HOXA10P31260 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA10P31260 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXA10P31260 AC100757.4-201ENST00000626934 759 ntBASIC18.83■□□□□ 0.6
HOXA10P31260 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HOXA10P31260 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA10P31260 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXA10P31260 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
HOXA10P31260 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA10P31260 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA10P31260 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 AC127383.1-201ENST00000444697 1800 ntBASIC18.82■□□□□ 0.6
HOXA10P31260 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA10P31260 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXA10P31260 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA10P31260 AC005740.2-201ENST00000511085 419 ntBASIC18.82■□□□□ 0.6
HOXA10P31260 RN7SL574P-201ENST00000581512 297 ntBASIC18.82■□□□□ 0.6
HOXA10P31260 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOXA10P31260 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA10P31260 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA10P31260 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA10P31260 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA10P31260 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HOXA10P31260 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXA10P31260 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA10P31260 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA10P31260 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA10P31260 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA10P31260 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXA10P31260 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA10P31260 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXA10P31260 MPRIPP1-201ENST00000452433 1089 ntBASIC18.81■□□□□ 0.6
HOXA10P31260 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms