Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB3BP20337 REXO1L1P-202ENST00000608646 1974 ntBASIC13.83□□□□□ -0.2
RAB3BP20337 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 AC087386.2-201ENST00000623212 4637 ntBASIC13.83□□□□□ -0.2
RAB3BP20337 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB3BP20337 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB3BP20337 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RAB3BP20337 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RAB3BP20337 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB3BP20337 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB3BP20337 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RAB3BP20337 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 FAM8A3P-201ENST00000427218 844 ntBASIC13.82□□□□□ -0.2
RAB3BP20337 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.82□□□□□ -0.2
RAB3BP20337 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 AC109635.5-201ENST00000533593 962 ntBASIC13.82□□□□□ -0.2
RAB3BP20337 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
RAB3BP20337 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 AC117489.1-201ENST00000625169 3217 ntBASIC13.82□□□□□ -0.2
RAB3BP20337 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAB3BP20337 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB3BP20337 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB3BP20337 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB3BP20337 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB3BP20337 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB3BP20337 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB3BP20337 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAB3BP20337 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAB3BP20337 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB3BP20337 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB3BP20337 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB3BP20337 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RAB3BP20337 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms