Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
XRCC1P18887 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.71■□□□□ 0.11
XRCC1P18887 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 MIR648-201ENST00000385046 94 ntBASIC15.71■□□□□ 0.11
XRCC1P18887 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC1P18887 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.71■□□□□ 0.11
XRCC1P18887 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.71■□□□□ 0.11
XRCC1P18887 LINC02560-201ENST00000596379 459 ntBASIC15.71■□□□□ 0.11
XRCC1P18887 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.71■□□□□ 0.11
XRCC1P18887 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
XRCC1P18887 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
XRCC1P18887 AC020658.6-201ENST00000623564 1870 ntBASIC15.71■□□□□ 0.11
XRCC1P18887 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
XRCC1P18887 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
XRCC1P18887 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC1P18887 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC1P18887 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.71■□□□□ 0.1
XRCC1P18887 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
XRCC1P18887 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.71■□□□□ 0.1
XRCC1P18887 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC1P18887 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
XRCC1P18887 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.7■□□□□ 0.1
XRCC1P18887 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
XRCC1P18887 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 MIR661-201ENST00000384842 89 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.7■□□□□ 0.1
XRCC1P18887 AC236430.1-201ENST00000402231 743 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.7■□□□□ 0.1
XRCC1P18887 SERBP1P3-201ENST00000459980 809 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.7■□□□□ 0.1
XRCC1P18887 AC009407.1-201ENST00000568958 598 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.7■□□□□ 0.1
XRCC1P18887 AC009118.2-201ENST00000613275 655 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 AC008761.3-201ENST00000624803 892 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 AC138035.3-201ENST00000622706 2791 ntBASIC15.7■□□□□ 0.1
XRCC1P18887 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
XRCC1P18887 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.7■□□□□ 0.1
XRCC1P18887 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
XRCC1P18887 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
XRCC1P18887 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
XRCC1P18887 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
XRCC1P18887 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XRCC1P18887 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.69■□□□□ 0.1
XRCC1P18887 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
XRCC1P18887 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.69■□□□□ 0.1
XRCC1P18887 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 TERF1P3-201ENST00000505638 1227 ntBASIC15.69■□□□□ 0.1
XRCC1P18887 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms