Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN2P17655 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.15■□□□□ 0.5
CAPN2P17655 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN2P17655 RHOQP1-201ENST00000555758 579 ntBASIC18.15■□□□□ 0.5
CAPN2P17655 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.15■□□□□ 0.5
CAPN2P17655 DUX4L45-201ENST00000566406 1057 ntBASIC18.15■□□□□ 0.5
CAPN2P17655 MIR5189-201ENST00000577370 114 ntBASIC18.15■□□□□ 0.5
CAPN2P17655 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN2P17655 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN2P17655 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CAPN2P17655 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN2P17655 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CAPN2P17655 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CAPN2P17655 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN2P17655 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CAPN2P17655 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN2P17655 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN2P17655 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CAPN2P17655 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CAPN2P17655 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
CAPN2P17655 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN2P17655 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN2P17655 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
CAPN2P17655 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.14■□□□□ 0.49
CAPN2P17655 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 AC099548.2-209ENST00000480264 625 ntBASIC18.14■□□□□ 0.49
CAPN2P17655 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN2P17655 PTP4A1P2-201ENST00000546033 454 ntBASIC18.14■□□□□ 0.49
CAPN2P17655 AC036164.1-201ENST00000570544 333 ntBASIC18.14■□□□□ 0.49
CAPN2P17655 AC025048.3-201ENST00000590609 569 ntBASIC18.14■□□□□ 0.49
CAPN2P17655 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 AC005702.4-201ENST00000618393 416 ntBASIC18.14■□□□□ 0.49
CAPN2P17655 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.14■□□□□ 0.49
CAPN2P17655 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN2P17655 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CAPN2P17655 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.14■□□□□ 0.49
CAPN2P17655 FRMD8P1-201ENST00000440433 1524 ntBASIC18.13■□□□□ 0.49
CAPN2P17655 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CAPN2P17655 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 AC006033.1-201ENST00000440505 426 ntBASIC18.13■□□□□ 0.49
CAPN2P17655 AC093724.1-201ENST00000448659 1027 ntBASIC18.13■□□□□ 0.49
CAPN2P17655 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.13■□□□□ 0.49
CAPN2P17655 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 AL589702.1-201ENST00000641229 1509 ntBASIC18.13■□□□□ 0.49
CAPN2P17655 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.13■□□□□ 0.49
CAPN2P17655 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CAPN2P17655 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.13■□□□□ 0.49
CAPN2P17655 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.12■□□□□ 0.49
CAPN2P17655 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CAPN2P17655 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms