Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
H2AFXP16104 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H2AFXP16104 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 AC016397.2-201ENST00000624848 1985 ntBASIC16.3■□□□□ 0.2
H2AFXP16104 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFXP16104 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.3■□□□□ 0.2
H2AFXP16104 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.3■□□□□ 0.2
H2AFXP16104 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
H2AFXP16104 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC16.3■□□□□ 0.2
H2AFXP16104 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 AC055811.4-201ENST00000624039 1754 ntBASIC16.3■□□□□ 0.2
H2AFXP16104 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H2AFXP16104 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.3■□□□□ 0.2
H2AFXP16104 AC118758.2-201ENST00000614242 2813 ntBASIC16.3■□□□□ 0.2
H2AFXP16104 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.3■□□□□ 0.2
H2AFXP16104 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2AFXP16104 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 AP005117.1-201ENST00000584346 1413 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.29■□□□□ 0.2
H2AFXP16104 RNF152P1-201ENST00000397754 604 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
H2AFXP16104 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
H2AFXP16104 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
H2AFXP16104 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 AL031055.1-201ENST00000606362 631 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
H2AFXP16104 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H2AFXP16104 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
H2AFXP16104 AC138969.3-201ENST00000546612 1459 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 AC138932.2-201ENST00000548268 1459 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 AC126755.4-201ENST00000549796 1459 ntBASIC16.29■□□□□ 0.2
H2AFXP16104 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H2AFXP16104 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
H2AFXP16104 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFXP16104 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFXP16104 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 AC019294.4-201ENST00000561777 2905 ntBASIC16.28■□□□□ 0.2
H2AFXP16104 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.28■□□□□ 0.2
H2AFXP16104 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
H2AFXP16104 IGHV3-47-201ENST00000425060 335 ntBASIC16.28■□□□□ 0.2
H2AFXP16104 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.28■□□□□ 0.2
H2AFXP16104 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.28■□□□□ 0.2
H2AFXP16104 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 TPT1P11-201ENST00000458482 498 ntBASIC16.28■□□□□ 0.2
H2AFXP16104 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.28■□□□□ 0.2
H2AFXP16104 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.28■□□□□ 0.2
H2AFXP16104 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
H2AFXP16104 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.28■□□□□ 0.2
H2AFXP16104 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H2AFXP16104 AC002347.1-201ENST00000569543 541 ntBASIC16.28■□□□□ 0.2
H2AFXP16104 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.28■□□□□ 0.2
H2AFXP16104 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.28■□□□□ 0.2
H2AFXP16104 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms