Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TIMP2P16035 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.59■□□□□ 0.09
TIMP2P16035 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TIMP2P16035 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TIMP2P16035 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.59■□□□□ 0.09
TIMP2P16035 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 AC084364.1-201ENST00000551967 1556 ntBASIC15.58■□□□□ 0.09
TIMP2P16035 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TIMP2P16035 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TIMP2P16035 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.58■□□□□ 0.08
TIMP2P16035 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 GK-202ENST00000378941 458 ntTSL 3 BASIC15.58■□□□□ 0.08
TIMP2P16035 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 TMEM14DP-201ENST00000422205 345 ntBASIC15.58■□□□□ 0.08
TIMP2P16035 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.58■□□□□ 0.08
TIMP2P16035 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.58■□□□□ 0.08
TIMP2P16035 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.58■□□□□ 0.08
TIMP2P16035 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.58■□□□□ 0.08
TIMP2P16035 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.58■□□□□ 0.08
TIMP2P16035 CLUHP6-201ENST00000580789 941 ntBASIC15.58■□□□□ 0.08
TIMP2P16035 AC093813.1-201ENST00000605066 256 ntBASIC15.58■□□□□ 0.08
TIMP2P16035 AC107373.2-201ENST00000607735 490 ntBASIC15.58■□□□□ 0.08
TIMP2P16035 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.58■□□□□ 0.08
TIMP2P16035 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.58■□□□□ 0.08
TIMP2P16035 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TIMP2P16035 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 AC092850.2-201ENST00000623821 2697 ntBASIC15.57■□□□□ 0.08
TIMP2P16035 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.57■□□□□ 0.08
TIMP2P16035 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TIMP2P16035 ACTG1P3-201ENST00000431775 1114 ntBASIC15.57■□□□□ 0.08
TIMP2P16035 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 AKR1B10P2-201ENST00000577332 927 ntBASIC15.57■□□□□ 0.08
TIMP2P16035 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TIMP2P16035 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.57■□□□□ 0.08
TIMP2P16035 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TIMP2P16035 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP2P16035 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TIMP2P16035 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms