Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 DUX4L27-201ENST00000554796 1261 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC140878.1-201ENST00000565277 250 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 GPALPP1-207ENST00000611650 899 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MIR6069-201ENST00000620069 79 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC112693.3-201ENST00000624819 1983 ntBASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DOBP13765 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DOBP13765 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AL596257.1-201ENST00000641463 2694 ntBASIC14.09□□□□□ -0.15
HLA-DOBP13765 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 C18orf15-201ENST00000623680 2534 ntBASIC14.09□□□□□ -0.15
HLA-DOBP13765 AL365209.1-201ENST00000624418 6473 ntBASIC14.09□□□□□ -0.15
HLA-DOBP13765 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC097493.3-201ENST00000509725 367 ntBASIC14.09□□□□□ -0.15
HLA-DOBP13765 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DOBP13765 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DOBP13765 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.08□□□□□ -0.15
HLA-DOBP13765 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DOBP13765 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DOBP13765 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DOBP13765 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DOBP13765 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HLA-DOBP13765 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DOBP13765 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DOBP13765 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DOBP13765 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms