Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AGAP7P-201ENST00000582299 2062 ntBASIC16.5■□□□□ 0.23
RARAP10276 AGAP14-201ENST00000624701 2060 ntBASIC16.5■□□□□ 0.23
RARAP10276 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.5■□□□□ 0.23
RARAP10276 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 AL139400.1-201ENST00000366220 510 ntBASIC16.5■□□□□ 0.23
RARAP10276 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.5■□□□□ 0.23
RARAP10276 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
RARAP10276 AC069262.1-201ENST00000539058 672 ntBASIC16.5■□□□□ 0.23
RARAP10276 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RARAP10276 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.5■□□□□ 0.23
RARAP10276 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RARAP10276 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RARAP10276 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.5■□□□□ 0.23
RARAP10276 AL607033.1-201ENST00000623900 1599 ntBASIC16.5■□□□□ 0.23
RARAP10276 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.5■□□□□ 0.23
RARAP10276 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RARAP10276 KRT8P12-202ENST00000472924 1397 ntBASIC16.5■□□□□ 0.23
RARAP10276 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.5■□□□□ 0.23
RARAP10276 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RARAP10276 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RARAP10276 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 FO393414.2-201ENST00000405153 598 ntBASIC16.49■□□□□ 0.23
RARAP10276 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.49■□□□□ 0.23
RARAP10276 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.49■□□□□ 0.23
RARAP10276 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 AC136604.1-201ENST00000418535 575 ntBASIC16.49■□□□□ 0.23
RARAP10276 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.49■□□□□ 0.23
RARAP10276 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.49■□□□□ 0.23
RARAP10276 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.49■□□□□ 0.23
RARAP10276 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 AL079307.3-201ENST00000556114 283 ntBASIC16.49■□□□□ 0.23
RARAP10276 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.49■□□□□ 0.23
RARAP10276 AL691403.2-201ENST00000618460 490 ntBASIC16.49■□□□□ 0.23
RARAP10276 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.49■□□□□ 0.23
RARAP10276 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 AC026748.1-201ENST00000624349 3251 ntBASIC16.49■□□□□ 0.23
RARAP10276 AC126365.1-201ENST00000578585 1514 ntBASIC16.49■□□□□ 0.23
RARAP10276 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RARAP10276 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RARAP10276 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RARAP10276 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RARAP10276 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RARAP10276 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RARAP10276 TSEN15P1-201ENST00000423257 515 ntBASIC16.48■□□□□ 0.23
RARAP10276 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.48■□□□□ 0.23
RARAP10276 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms