Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 MIR663B-201ENST00000408361 115 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 AC105129.2-201ENST00000559536 390 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 RN7SL48P-201ENST00000579283 293 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 MIR4313-201ENST00000580760 101 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 AC011477.6-201ENST00000604980 1927 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 AC148477.4-201ENST00000613430 1793 ntBASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.62■□□□□ 0.89
CSB-PGBD3P0DP91 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC015967.2-201ENST00000624092 234 ntBASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC006435.4-201ENST00000625037 234 ntBASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AL356737.1-201ENST00000634391 234 ntBASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 LRRC59-203ENST00000576448 1531 ntBASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 AC018695.7-201ENST00000624587 2492 ntBASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CSB-PGBD3P0DP91 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 POM121L10P-201ENST00000436994 1285 ntBASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 AL023775.1-201ENST00000454907 1746 ntBASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 AC011676.5-201ENST00000624864 2660 ntBASIC20.6■□□□□ 0.89
CSB-PGBD3P0DP91 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSB-PGBD3P0DP91 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms