Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TPM2P07951 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TPM2P07951 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 AC018712.1-201ENST00000455767 687 ntBASIC17.98■□□□□ 0.47
TPM2P07951 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.98■□□□□ 0.47
TPM2P07951 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.98■□□□□ 0.47
TPM2P07951 ACTL9-202ENST00000612068 1252 ntBASIC17.98■□□□□ 0.47
TPM2P07951 TP73-AS1-207ENST00000624167 988 ntBASIC17.98■□□□□ 0.47
TPM2P07951 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 AC148477.4-201ENST00000613430 1793 ntBASIC17.98■□□□□ 0.47
TPM2P07951 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.98■□□□□ 0.47
TPM2P07951 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TPM2P07951 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TPM2P07951 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.98■□□□□ 0.47
TPM2P07951 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 AC136759.1-202ENST00000530858 2194 ntBASIC17.97■□□□□ 0.47
TPM2P07951 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.97■□□□□ 0.47
TPM2P07951 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.97■□□□□ 0.47
TPM2P07951 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TPM2P07951 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
TPM2P07951 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
TPM2P07951 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM2P07951 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM2P07951 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TPM2P07951 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.96■□□□□ 0.47
TPM2P07951 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM2P07951 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TPM2P07951 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TPM2P07951 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TPM2P07951 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM2P07951 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TPM2P07951 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.96■□□□□ 0.47
TPM2P07951 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM2P07951 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms