Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD74P04233 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.23□□□□□ -0.29
CD74P04233 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.23□□□□□ -0.29
CD74P04233 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 RPS8P6-201ENST00000426177 609 ntBASIC13.23□□□□□ -0.29
CD74P04233 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.23□□□□□ -0.29
CD74P04233 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 AC105339.3-201ENST00000560043 636 ntBASIC13.23□□□□□ -0.29
CD74P04233 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.23□□□□□ -0.29
CD74P04233 AC024267.1-201ENST00000582320 895 ntBASIC13.23□□□□□ -0.29
CD74P04233 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CD74P04233 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.23□□□□□ -0.29
CD74P04233 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD74P04233 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
CD74P04233 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD74P04233 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CD74P04233 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 AC117489.1-201ENST00000625169 3217 ntBASIC13.22□□□□□ -0.29
CD74P04233 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 AC113367.3-201ENST00000508316 1912 ntBASIC13.22□□□□□ -0.29
CD74P04233 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 AKR1C7P-201ENST00000305623 895 ntBASIC13.22□□□□□ -0.29
CD74P04233 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CD74P04233 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.22□□□□□ -0.29
CD74P04233 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.22□□□□□ -0.29
CD74P04233 PHKG1P2-201ENST00000457537 863 ntBASIC13.22□□□□□ -0.29
CD74P04233 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.22□□□□□ -0.29
CD74P04233 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.22□□□□□ -0.29
CD74P04233 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.22□□□□□ -0.29
CD74P04233 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.22□□□□□ -0.29
CD74P04233 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD74P04233 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms