Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL139099.5-201ENST00000635274 300 ntBASIC16.92■□□□□ 0.3
CHRNA1P02708 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA1P02708 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA1P02708 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA1P02708 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA1P02708 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA1P02708 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 CD8B2-202ENST00000417670 633 ntBASIC16.91■□□□□ 0.3
CHRNA1P02708 Z93015.1-201ENST00000451718 390 ntBASIC16.91■□□□□ 0.3
CHRNA1P02708 KRT8P13-201ENST00000463294 1010 ntBASIC16.91■□□□□ 0.3
CHRNA1P02708 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA1P02708 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA1P02708 ECM1P1-201ENST00000604092 1279 ntBASIC16.91■□□□□ 0.3
CHRNA1P02708 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHRNA1P02708 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA1P02708 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHRNA1P02708 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA1P02708 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA1P02708 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 AC006449.5-201ENST00000610658 2098 ntBASIC16.9■□□□□ 0.3
CHRNA1P02708 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA1P02708 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CHRNA1P02708 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA1P02708 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 AC007969.1-201ENST00000433675 447 ntBASIC16.9■□□□□ 0.3
CHRNA1P02708 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA1P02708 AL591846.1-201ENST00000451736 433 ntBASIC16.9■□□□□ 0.3
CHRNA1P02708 AC104306.2-201ENST00000451877 341 ntBASIC16.9■□□□□ 0.3
CHRNA1P02708 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRNA1P02708 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 AC084346.2-201ENST00000607097 949 ntBASIC16.9■□□□□ 0.3
CHRNA1P02708 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CHRNA1P02708 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRNA1P02708 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRNA1P02708 AL139384.1-201ENST00000612143 3047 ntBASIC16.89■□□□□ 0.29
CHRNA1P02708 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRNA1P02708 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRNA1P02708 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRNA1P02708 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms