Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
LMNAP02545 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LMNAP02545 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LMNAP02545 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.49■□□□□ 0.23
LMNAP02545 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
LMNAP02545 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.49■□□□□ 0.23
LMNAP02545 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.49■□□□□ 0.23
LMNAP02545 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.49■□□□□ 0.23
LMNAP02545 CTBP2P3-201ENST00000585629 1255 ntBASIC16.49■□□□□ 0.23
LMNAP02545 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LMNAP02545 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.49■□□□□ 0.23
LMNAP02545 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.49■□□□□ 0.23
LMNAP02545 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LMNAP02545 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 ME2P1-201ENST00000426028 1970 ntBASIC16.48■□□□□ 0.23
LMNAP02545 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 ANKRD19P-201ENST00000338192 862 ntBASIC16.48■□□□□ 0.23
LMNAP02545 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.48■□□□□ 0.23
LMNAP02545 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LMNAP02545 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.48■□□□□ 0.23
LMNAP02545 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 AL355994.2-201ENST00000447882 704 ntBASIC16.48■□□□□ 0.23
LMNAP02545 ELK1P1-201ENST00000485699 580 ntBASIC16.48■□□□□ 0.23
LMNAP02545 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 KRT18P34-201ENST00000488218 1270 ntBASIC16.48■□□□□ 0.23
LMNAP02545 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 AL079307.3-201ENST00000556114 283 ntBASIC16.48■□□□□ 0.23
LMNAP02545 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.48■□□□□ 0.23
LMNAP02545 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.48■□□□□ 0.23
LMNAP02545 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.48■□□□□ 0.23
LMNAP02545 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 AC008735.3-201ENST00000596646 500 ntBASIC16.48■□□□□ 0.23
LMNAP02545 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.48■□□□□ 0.23
LMNAP02545 AC004790.1-201ENST00000612686 536 ntBASIC16.48■□□□□ 0.23
LMNAP02545 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.48■□□□□ 0.23
LMNAP02545 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.48■□□□□ 0.23
LMNAP02545 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 TCAF2P1-201ENST00000291129 2421 ntBASIC16.48■□□□□ 0.23
LMNAP02545 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 AL391256.1-201ENST00000443260 1855 ntBASIC16.48■□□□□ 0.23
LMNAP02545 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LMNAP02545 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LMNAP02545 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms