Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
VAPBO95292 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VAPBO95292 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VAPBO95292 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 KRT18P13-201ENST00000400056 1290 ntBASIC15.81■□□□□ 0.12
VAPBO95292 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.81■□□□□ 0.12
VAPBO95292 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
VAPBO95292 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.81■□□□□ 0.12
VAPBO95292 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
VAPBO95292 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.81■□□□□ 0.12
VAPBO95292 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.81■□□□□ 0.12
VAPBO95292 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.81■□□□□ 0.12
VAPBO95292 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 AL079307.3-201ENST00000556114 283 ntBASIC15.81■□□□□ 0.12
VAPBO95292 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.81■□□□□ 0.12
VAPBO95292 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VAPBO95292 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VAPBO95292 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VAPBO95292 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.8■□□□□ 0.12
VAPBO95292 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VAPBO95292 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.8■□□□□ 0.12
VAPBO95292 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
VAPBO95292 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.8■□□□□ 0.12
VAPBO95292 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.8■□□□□ 0.12
VAPBO95292 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VAPBO95292 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VAPBO95292 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.8■□□□□ 0.12
VAPBO95292 AL645939.2-201ENST00000427340 991 ntBASIC15.8■□□□□ 0.12
VAPBO95292 AL512356.2-201ENST00000546955 174 ntBASIC15.8■□□□□ 0.12
VAPBO95292 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.8■□□□□ 0.12
VAPBO95292 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
VAPBO95292 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.8■□□□□ 0.12
VAPBO95292 LINC00628-201ENST00000628516 1289 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms