Protein–RNA interactions for Protein: O75164

KDM4A, Lysine-specific demethylase 4A, humanhuman

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4AO75164 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.79■□□□□ 0.6
KDM4AO75164 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KDM4AO75164 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.79■□□□□ 0.6
KDM4AO75164 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.78■□□□□ 0.6
KDM4AO75164 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.78■□□□□ 0.6
KDM4AO75164 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 HNRNPUP1-201ENST00000554987 333 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 AC025048.3-201ENST00000590609 569 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 AC011467.4-201ENST00000594891 528 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 AL096865.1-201ENST00000606796 927 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 AC005702.4-201ENST00000618393 416 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 AL109936.8-201ENST00000641772 604 ntBASIC18.78■□□□□ 0.6
KDM4AO75164 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.78■□□□□ 0.6
KDM4AO75164 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.78■□□□□ 0.6
KDM4AO75164 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KDM4AO75164 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.77■□□□□ 0.6
KDM4AO75164 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.77■□□□□ 0.6
KDM4AO75164 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.77■□□□□ 0.6
KDM4AO75164 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.77■□□□□ 0.6
KDM4AO75164 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.77■□□□□ 0.6
KDM4AO75164 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.77■□□□□ 0.6
KDM4AO75164 ZNF890P-202ENST00000530367 1156 ntBASIC18.77■□□□□ 0.6
KDM4AO75164 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.77■□□□□ 0.6
KDM4AO75164 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.77■□□□□ 0.6
KDM4AO75164 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
KDM4AO75164 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
KDM4AO75164 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KDM4AO75164 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KDM4AO75164 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KDM4AO75164 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KDM4AO75164 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KDM4AO75164 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
KDM4AO75164 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
KDM4AO75164 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.77■□□□□ 0.59
KDM4AO75164 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KDM4AO75164 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.76■□□□□ 0.59
KDM4AO75164 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDM4AO75164 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KDM4AO75164 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDM4AO75164 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KDM4AO75164 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
KDM4AO75164 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms