Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
PEX1O43933 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PEX1O43933 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PEX1O43933 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PEX1O43933 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 AC008677.1-201ENST00000519230 1561 ntBASIC15.41■□□□□ 0.06
PEX1O43933 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.41■□□□□ 0.06
PEX1O43933 HMGA1P7-201ENST00000406908 502 ntBASIC15.41■□□□□ 0.06
PEX1O43933 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.41■□□□□ 0.06
PEX1O43933 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.41■□□□□ 0.06
PEX1O43933 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 AC004835.2-201ENST00000603762 682 ntBASIC15.41■□□□□ 0.06
PEX1O43933 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 AC105339.1-204ENST00000636249 355 ntBASIC15.41■□□□□ 0.06
PEX1O43933 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
PEX1O43933 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PEX1O43933 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.41■□□□□ 0.06
PEX1O43933 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PEX1O43933 TOP3BP1-201ENST00000420768 1380 ntBASIC15.4■□□□□ 0.06
PEX1O43933 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 AL671277.1-201ENST00000429656 993 ntBASIC15.4■□□□□ 0.06
PEX1O43933 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.4■□□□□ 0.06
PEX1O43933 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.4■□□□□ 0.06
PEX1O43933 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.4■□□□□ 0.06
PEX1O43933 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.4■□□□□ 0.06
PEX1O43933 AC027796.2-201ENST00000575326 344 ntBASIC15.4■□□□□ 0.06
PEX1O43933 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.4■□□□□ 0.06
PEX1O43933 AL513210.1-201ENST00000629608 234 ntBASIC15.4■□□□□ 0.06
PEX1O43933 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PEX1O43933 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PEX1O43933 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.4■□□□□ 0.06
PEX1O43933 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms