Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A1O14983 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A1O14983 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A1O14983 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.89■□□□□ 0.46
ATP2A1O14983 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A1O14983 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A1O14983 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
ATP2A1O14983 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.89■□□□□ 0.46
ATP2A1O14983 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.89■□□□□ 0.45
ATP2A1O14983 FAM86MP-201ENST00000340703 885 ntBASIC17.89■□□□□ 0.45
ATP2A1O14983 MIR1908-201ENST00000410394 80 ntBASIC17.89■□□□□ 0.45
ATP2A1O14983 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A1O14983 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A1O14983 CNN2P8-201ENST00000421872 913 ntBASIC17.89■□□□□ 0.45
ATP2A1O14983 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A1O14983 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A1O14983 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.89■□□□□ 0.45
ATP2A1O14983 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A1O14983 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP2A1O14983 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.88■□□□□ 0.45
ATP2A1O14983 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.88■□□□□ 0.45
ATP2A1O14983 AL138799.1-201ENST00000448213 1675 ntBASIC17.88■□□□□ 0.45
ATP2A1O14983 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
ATP2A1O14983 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.88■□□□□ 0.45
ATP2A1O14983 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
ATP2A1O14983 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.88■□□□□ 0.45
ATP2A1O14983 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 RHOXF1P1-202ENST00000635473 501 ntBASIC17.88■□□□□ 0.45
ATP2A1O14983 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ATP2A1O14983 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
ATP2A1O14983 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.88■□□□□ 0.45
ATP2A1O14983 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 PCDHA14-201ENST00000506751 2298 ntBASIC17.87■□□□□ 0.45
ATP2A1O14983 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ATP2A1O14983 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ATP2A1O14983 FAM21FP-201ENST00000426241 1131 ntBASIC17.87■□□□□ 0.45
ATP2A1O14983 AL355994.2-201ENST00000447882 704 ntBASIC17.87■□□□□ 0.45
ATP2A1O14983 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.87■□□□□ 0.45
ATP2A1O14983 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms