Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A1O00337 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC28A1O00337 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 KRT18P32-201ENST00000424695 1287 ntBASIC15.15■□□□□ 0.02
SLC28A1O00337 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A1O00337 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A1O00337 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A1O00337 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC28A1O00337 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A1O00337 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A1O00337 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A1O00337 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A1O00337 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A1O00337 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A1O00337 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 AL022342.1-201ENST00000400363 863 ntBASIC15.14■□□□□ 0.01
SLC28A1O00337 SPDYE17-201ENST00000412399 783 ntBASIC15.14■□□□□ 0.01
SLC28A1O00337 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC28A1O00337 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC28A1O00337 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A1O00337 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A1O00337 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
SLC28A1O00337 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A1O00337 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC28A1O00337 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A1O00337 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A1O00337 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC28A1O00337 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC28A1O00337 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SLC28A1O00337 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A1O00337 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC28A1O00337 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A1O00337 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC28A1O00337 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms