Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 AL691432.1-201ENST00000596308 1422 ntBASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.47□□□□□ -0.25
TMEM235A6NFC5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 VN2R19P-201ENST00000442399 1052 ntBASIC13.47□□□□□ -0.25
TMEM235A6NFC5 FAM197Y8-203ENST00000450145 560 ntBASIC13.47□□□□□ -0.25
TMEM235A6NFC5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 GRK6P1-201ENST00000400595 1711 ntBASIC13.47□□□□□ -0.25
TMEM235A6NFC5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TMEM235A6NFC5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TMEM235A6NFC5 RPS2P28-201ENST00000314255 741 ntBASIC13.46□□□□□ -0.25
TMEM235A6NFC5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms