Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AP000550.4-202ENST00000639755 178 ntBASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
TRDV1A0A1B0GX56 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AC024267.1-201ENST00000582320 895 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AL356488.2-201ENST00000602755 427 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 REXO1L6P-202ENST00000619970 1078 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AL928921.2-201ENST00000641325 2442 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 AC113367.3-201ENST00000508316 1912 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.84□□□□□ -0.19
TRDV1A0A1B0GX56 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRDV1A0A1B0GX56 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRDV1A0A1B0GX56 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
TRDV1A0A1B0GX56 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRDV1A0A1B0GX56 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms